Disease: Malignant neoplasm of breast
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs927650
CYP24A1
0.763 0.240 20 54156202 intron variant T/A;C snv 9
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 103
rs78378222
TP53
0.662 0.360 17 7668434 3 prime UTR variant T/G snv 8.3E-03 22
rs77375493
INSL6 ; JAK2
0.458 0.760 9 5073770 missense variant G/A;T snv 3.5E-04 181
rs762846821
TP53
0.614 0.320 17 7675151 missense variant C/A;T snv 8.0E-06 56
rs7041
GC
0.576 0.800 4 71752617 missense variant A/C;T snv 0.52; 4.0E-06 61
rs6265
BDNF ; BDNF-AS
0.436 0.760 11 27658369 missense variant C/T snv 0.19 0.15 264
rs4950928
CHI3L1
0.653 0.560 1 203186754 upstream gene variant G/A;C;T snv 32
rs4516035
VDR
0.776 0.360 12 47906043 non coding transcript exon variant T/C snv 0.31 10
rs401618
HLA-A
0.827 0.120 6 29982433 downstream gene variant A/G;T snv 5
rs397517132
EGFR
0.623 0.280 7 55191846 missense variant A/T snv 48
rs397514606
AKT3
0.763 0.320 1 243695714 missense variant C/T snv 13
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs387906659
AKT2
0.742 0.280 19 40257052 stop gained C/A;T snv 13
rs3834129
CASP8
0.627 0.560 2 201232809 upstream gene variant AGTAAG/- del 0.48 38
rs3731249
CDKN2A
0.683 0.320 9 21970917 missense variant C/A;G;T snv 2.1E-02 22
rs361525
TNF
0.562 0.760 6 31575324 upstream gene variant G/A snv 4.6E-02 62
rs36053993
MUTYH
0.677 0.280 1 45331556 missense variant C/T snv 3.0E-03 3.3E-03 24
rs34767364
NBN
0.701 0.280 8 89971232 missense variant G/A;C snv 2.5E-03 20
rs34301344
ARL11
0.689 0.400 13 49630893 stop gained G/A snv 9.7E-03 7.9E-03 22
rs3136025
LIG3
0.882 0.080 17 35002030 missense variant G/A snv 6.8E-03 2.7E-02 3
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs28934578
TP53
0.605 0.600 17 7675088 missense variant C/A;T snv 4.0E-06 36
rs2853676
TERT
0.667 0.560 5 1288432 intron variant T/A;C snv 23